Gene Set Analysis in R – the GSAR Package
نویسندگان
چکیده
3 Statistical methods 4 3.1 Wald-Wolfowitz test . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4 3.2 Kolmogorov-Smirnov tests . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5 3.3 Mean deviation tests . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 3.4 Aggregated F-test . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7 3.5 Gene sets net correlations analysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7 3.5.1 Method . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7 3.5.2 The problem of zero standard deviation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8
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